MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus murinus
LAC.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 225
bases: 2,084,440 bps
CDS: 1,985
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,059
Total number of protein coding genes annotated/found:
1,985
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Items 41 - 60
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5005|JADGKI010000067.1
SEQF5005_00118
Genome Viewer
NA
AA
228/76
31741-31514
hypothetical protein
SEQF5005|JADGKI010000067.1
SEQF5005_00119
Genome Viewer
NA
AA
765/255
31919-32683
Putative TrmH family tRNA/rRNA methyltransferase
SEQF5005|JADGKI010000067.1
SEQF5005_00123
Genome Viewer
NA
AA
327/109
36590-36264
hypothetical protein
SEQF5005|JADGKI010000067.1
SEQF5005_00126
Genome Viewer
NA
AA
489/163
38819-38331
hypothetical protein
SEQF5005|JADGKI010000067.1
SEQF5005_00128
Genome Viewer
NA
AA
351/117
40016-40366
hypothetical protein
SEQF5005|JADGKI010000159.1
SEQF5005_00133
Genome Viewer
NA
AA
915/305
1265-351
IS110 family transposase ISCARN28
SEQF5005|JADGKI010000163.1
SEQF5005_00134
Genome Viewer
NA
AA
1173/391
102-1274
IS256 family transposase IS1542
SEQF5005|JADGKI010000164.1
SEQF5005_00135
Genome Viewer
NA
AA
537/179
714-178
hypothetical protein
SEQF5005|JADGKI010000184.1
SEQF5005_00137
Genome Viewer
NA
AA
870/290
245-1114
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00138
Genome Viewer
NA
AA
1857/619
66-1922
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00140
Genome Viewer
NA
AA
702/234
3516-4217
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00143
Genome Viewer
NA
AA
168/56
5131-5298
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00145
Genome Viewer
NA
AA
879/293
6027-6905
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00148
Genome Viewer
NA
AA
819/273
8383-9201
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00149
Genome Viewer
NA
AA
825/275
9451-10275
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00159
Genome Viewer
NA
AA
591/197
20928-20338
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00164
Genome Viewer
NA
AA
2655/885
33644-30990
Calcium-transporting ATPase 1
SEQF5005|JADGKI010000069.1
SEQF5005_00165
Genome Viewer
NA
AA
141/47
34070-33930
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00167
Genome Viewer
NA
AA
735/245
35835-36569
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00170
Genome Viewer
NA
AA
483/161
38951-39433
hypothetical protein
🡄
Items 41 - 60
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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